Welcome to Eddie Salinas . com AWS-backed website

See the text/links below for pages previously on the website. The website http://www.eddiesalinas.com now re-directs to this page.

Link Text/Notes

COMET COalescent with Multiple mergers Employing Thermodynamic integration : phylogeny/coalescent analysis program incorporating multiple-mergers trees (n-ary)

K-CUDA data-mining of micro-array data for possible heteromeric transcription factors complexes using GPU/CUDA acceleration hardware

K-Cloud this data-mining of micro-array data for possible heteromeric transcription factors complexes via AWS cloud

VDJ Server D3 Charts "dynachart" D3/javascript-based plotting of some immune-repertoire profile data for VDJ-server. The VDJ genes help form antibodies which can be "custom-made" to specific antibodies as part of the adaptive immune system to help our bodies defend against antigens (e.g. bacteria, viruses, and other possible antigens). The system can be adaptable by using different genes in various combinations (hence "V-D-J recombination") to try different proteins against the myriad antigens.

phylogenetics Other phylogeny projects/codes. I wrote a Java-based phylogeny calculation tool (relying on the PAL ; the phylogenetic analysis library). Using PhyML I also generated an animation of trees from the 'hill-climbing' aspect of the maximum-likelihood approach.

Link	Text/Notes
COMET	COalescent with Multiple mergers Employing Thermodynamic integration : phylogeny/coalescent analysis program incorporating multiple-mergers trees (n-ary)
K-CUDA	data-mining of micro-array data for possible heteromeric transcription factors complexes using GPU/CUDA acceleration hardware
K-Cloud	this data-mining of micro-array data for possible heteromeric transcription factors complexes via AWS cloud
VDJ Server D3 Charts "dynachart"	D3/javascript-based plotting of some immune-repertoire profile data for VDJ-server. The VDJ genes help form antibodies which can be "custom-made" to specific antibodies as part of the adaptive immune system to help our bodies defend against antigens (e.g. bacteria, viruses, and other possible antigens). The system can be adaptable by using different genes in various combinations (hence "V-D-J recombination") to try different proteins against the myriad antigens.
phylogenetics	Other phylogeny projects/codes. I wrote a Java-based phylogeny calculation tool (relying on the PAL ; the phylogenetic analysis library). Using PhyML I also generated an animation of trees from the 'hill-climbing' aspect of the maximum-likelihood approach.